Sökning: "Contig"

Hittade 4 uppsatser innehållade ordet Contig.

  1. 1. Genomic sequencing of freshwater mussel unio tumidus using the minion

    Magister-uppsats, Högskolan i Skövde/Institutionen för biovetenskap

    Författare :Firouzeh Mehni; [2021]
    Nyckelord :;

    Sammanfattning : Freshwater mussels are aquatic organisms that are involved in nutrient cycling and water purification. Freshwater mussels have filtering activity and transfer nutrients and energy-rich organic compounds from the water column to the sediments. LÄS MER

  3. 2. Contig assembly and plasmid analysis using DNA barcodes

    Master-uppsats, Lunds universitet/Beräkningsbiologi och biologisk fysik - Genomgår omorganisation

    Författare :Christoffer Pichler; [2016]
    Nyckelord :DNA Barcode; Contig; Plasmid; Phase Randomization; Tree; Free Energy; P-value; Physics and Astronomy;

    Sammanfattning : Two methods of computational analysis of DNA barcodes are presented. A DNA barcode is formed by making GC-rich regions of a DNA molecule fluoresce while AT-rich regions remain dark, thus when stretched using nano-channels and viewed in a microscope, the DNA molecule will resemble a barcode with black and white stripes. LÄS MER

  4. 3. Draft genome assembly and bioinformatic analysis of a denovo sequenced genome of Treponema phagedenis like strain V1

    Master-uppsats, SLU/Dept. of Animal Breeding and Genetics

    Författare :Mamoona Mushtaq; [2010]
    Nyckelord :Treponema phagedenis like strain V1; Next Generation Sequencing Technologies; Denovo Assembly; Digital dermatitis; lipoproteins;

    Sammanfattning : In this study, a draft genome assembly of Treponema phagedenis-like strain V1 was obtained using Mira3 assembler. T. phagedenis-like strain V1 was isolated and characterized from a digital dermatitis lesions, a skin disease causing lameness in cattle. LÄS MER

  5. 4. Analysis of gene expression in barley upon aphid attack

    Uppsats för yrkesexamina på grundnivå, Institutionen för livsvetenskaper

    Författare :Nicolas Richerioux; [2007]
    Nyckelord :aphids; barley; R. padi; defense reactions; gene regulation; genomic PCR;

    Sammanfattning : Since plants can not escape their predators by walking, they use some other defense systems, like induction or repression of defense genes. A microarray experiment performed with barley attacked by the bird cherry-oat aphid (Rhopalosiphum padi), led to the hypothesis that contig 16360 (similar to ser/thr kinases) could be linked with the resistance of barley against R. LÄS MER