Sökning: "Reference-guided Assembly"

Hittade 2 uppsatser innehållade orden Reference-guided Assembly.

1. 1. Whole genome assembly, annotation and bioinformatics analysis of streptococcus agalactiae isolated from cow suffering of mastitis

   Master-uppsats, SLU/Dept. of Animal Breeding and Genetics

   Författare :Saima Zubair; [2010]
   Nyckelord :Streptococcus agalactiae; Next Generation Sequencing Technologies; Reference-guided Assembly; Mastitis; Horizontal Gene Transfer; Secretory Proteins;

   Sammanfattning : Streptococcus agalactiae is an obligate parasite and contagious pathogen living within the epithelial cells lining of acini of the bovine udder, causing milk disease mastitis particularly subclinical mastitis in dairy cattle. This bacterial pathogen also causes infection in pre-milking heifers, as well as neonates. LÄS MER

3. 2. Whole genome assembly, annotation and bioinformatics analysis of Bacillus amyloliquefaciens strain UCMB5113"

   Master-uppsats, SLU/Dept. of Animal Breeding and Genetics

   Författare :Adnan Niazi; [2010]
   Nyckelord :genome assembly; Bacillus amyloliquefaciens UCMB5113; plant growth and protection; bacterial biocontrol; antimicrobial genes;

   Sammanfattning : Bacillus amyloliquefaciens strain UCMB5113 is a Gram negative rhizo-bacterium, that produces antimicrobial compounds and induce plant basal defense with unknown genetic mechanism that suppress soil-borne plants and pathogens. Paired-end reads of length 75 bp with insert size of ~230 bp were sequenced from the genome of UCMB5113 by Illumina multiplex technology. LÄS MER