Sökning: "pan-genome"

Hittade 4 uppsatser innehållade ordet pan-genome.

  1. 1. Pseudomonas aeruginosa gene expression analysis using pangenome and PAO1 reference genomes

    Master-uppsats, Lunds universitet/Examensarbeten i bioinformatik

    Författare :Yi Su; [2023]
    Nyckelord :Biology and Life Sciences;

    Sammanfattning : Development in sequencing technologies has made the analyses of genetic material much more accessible. Processing sequenced data for an accurate analysis comes with its challenges, especially with the studies in microbial in clinical in vivo samples where difficulties in the collection of these samples for sequencing could lower the quality and contamination from the human host which might affect the accuracy of downstream analysis. LÄS MER

  2. 2. Large-scale pan-genome analysis of Campylobacter jejuni : with a special focus on virulence factors in the accessory genome

    Master-uppsats, Uppsala universitet/Institutionen för biologisk grundutbildning

    Författare :Milena Regina Trabert; [2022]
    Nyckelord :;

    Sammanfattning : .... LÄS MER

  3. 3. Genomic comparison of shiga toxin-producing E. coli O157:H7 from ruminants and humans

    Uppsats för yrkesexamina på avancerad nivå, Uppsala universitet/Institutionen för medicinsk biokemi och mikrobiologi

    Författare :Linnéa Good; [2022]
    Nyckelord :;

    Sammanfattning : Shiga toxin-producing E. coli (STEC) are zoonotic pathogens that frequently colonise ruminants without them showing any symptoms. In humans, STEC cause diarrhoeal disease and occasionally leads to the life-threatening disease haemolytic-uraemic syndrome (HUS). LÄS MER

  4. 4. Study of the Genetic Dynamics in Pan-genomes for Six Bacterial Species

    Uppsats för yrkesexamina på avancerad nivå, Uppsala universitet/Institutionen för medicinsk biokemi och mikrobiologi

    Författare :Jennifer Johansson; [2021]
    Nyckelord :pan-genome; core genome; accessory genome; genetic dynamics;

    Sammanfattning : Foodborne diseases are a growing health problem today and can be caused by eating food contaminated with bacteria. To monitor known foodborne diseases, institutions keep track of bacteria in surveillance projects. Whole genome sequencing is becoming the new standard method for comparing isolates, which generates large amounts of data. LÄS MER