Sökning: "genomes"

Visar resultat 1 - 5 av 85 uppsatser innehållade ordet genomes.

  1. 1. Estimating Variant Intolerance for Genes of Cattle

    Master-uppsats, SLU/Dept. of Animal Breeding and Genetics

    Författare :Simon Lanigan; [2024]
    Nyckelord :Genes; Cattle;

    Sammanfattning : Cattle play a crucial role in providing nutrition and economic stability worldwide. Threats to their health, particularly infectious diseases, and genetic mutations, can have profound implications for both animal and human livelihoods. LÄS MER

  3. 2. Nanometa Live : A real-time metagenomic analysis pipeline and interface for species classification and pathogen characterization

    Kandidat-uppsats, Högskolan i Skövde/Institutionen för biovetenskap

    Författare :Kristoffer Sandås; [2023]
    Nyckelord :;

    Sammanfattning : Metagenomics studies the totality of genomes of all species in a microbial community. It is a young, growing field with medical, industrial, and ecological applications. Abundant metagenomic data is being produced today, but there is a lack of interpretation and visualization tools. LÄS MER

  4. 3. Integrative Approaches Illuminate Evolutionary Divergence in the Bar-tailed Lark Complex ( Ammomanes cinctura)

    Master-uppsats, Uppsala universitet/Institutionen för biologisk grundutbildning

    Författare :Zongzhuang Liu; [2023]
    Nyckelord :Alaudidae; Ammomanes cinctura; Integrative taxonomy; Genomics; Plumage; Evolutionary divergence;

    Sammanfattning : Ammomanes cinctura (Bar-tailed Lark) is a lark species with a wide distribution in the Palearctic. One of its subspecies, A. c. LÄS MER

  5. 4. An assessment of the surrogate host metagenome-assembled genome decontamination for non-model host organisms : Proof-of-concept

    Kandidat-uppsats, Högskolan i Skövde/Institutionen för biovetenskap

    Författare :André Bourbonnais; [2023]
    Nyckelord :;

    Sammanfattning : In this study, a novel method has been assessed to bridge the gap between bioinformatics and ecological conservation efforts to gain evidence to further base conservational plans on. Herein, the validity of using a provisional host metagenome-assembled metagenome to decontaminate the data from host contamination was concluded. LÄS MER

  7. 5. EVALUATING TRANSCRIPTOME ASSEMBLY POTENTIAL BY DIFFERENT DE NOVO SEQUENCE ASSEMBLER TYPES

    Kandidat-uppsats, Högskolan i Skövde/Institutionen för biovetenskap

    Författare :Luan Gardenalli; [2023]
    Nyckelord :;

    Sammanfattning : With the rise of NGS technologies, the transcriptomes of non-model organisms can be reconstructed even with the absence of a reference genome, using de novo assembly tools. There is a wide range of de novo assembly tools frequently being developed, however, there is a still a knowledge gap about the different effects and efficiency of different de novo assembly software types for RNA-seq assembly. LÄS MER