Sökning: "bioinformatics pipelines"

Visar resultat 1 - 5 av 11 uppsatser innehållade orden bioinformatics pipelines.

  1. 1. Improving Usability of Bioinformatics Software with an Integrated Web Tool System for Cancer Diagnostics

    Master-uppsats, KTH/Skolan för elektroteknik och datavetenskap (EECS)

    Författare :Solbritt Gateman; [2023]
    Nyckelord :Web development; bioinformatics pipelines; precision medicine; user-centred design; interface design;

    Sammanfattning : Precision cancer medicine is an area of research that involves complex bioinformatics software for the clinical analysis pipelines that sequencing data is passed through. A research team at Karolinska Institutet (KI) is running clinical trials to test new methods of precision cancer medicine and is working on creating a new web application that will be integrated with their two existing applications to aid bioinformaticians in their work of running pipelines and producing clinical reports for the hospitals. LÄS MER

  3. 2. Computational detection of human papilloma virus in the cervical cancer genome

    Magister-uppsats, Högskolan i Skövde/Institutionen för biovetenskap

    Författare :Hope Omoghene; [2023]
    Nyckelord :VirusFinder2; HPViewer; VirusSeq; HPV; Bioinformatics; Cervical cancer;

    Sammanfattning : Global research and development have witnessed new horizons in technological advancements, especially in the use of new-generation bioinformatic tools to solve human needs. Cervical cancer, caused by a sexually transmitted virus like human papillomavirus (HPV), is one of the most common cancers threatening women's health. LÄS MER

  4. 3. Sepsis-associated Escherichia coli whole-genome sequencing analysis using in-house developed pipeline and 1928 diagnostics tool

    Master-uppsats, Högskolan i Skövde/Institutionen för biovetenskap

    Författare :Geivi Lember; [2021]
    Nyckelord :;

    Sammanfattning : Sepsis is a life-threatening condition that is caused by a dysregulated host response to infection. Timely detection of sepsis and antibiotic treatment is important for the patient’s recovery from sepsis. LÄS MER

  5. 4. Detection of aberrant events in RNA for clinical diagnostics

    Master-uppsats, Uppsala universitet/Institutionen för biologisk grundutbildning

    Författare :Mei Wu; [2021]
    Nyckelord :rare; disease; clinical; bioinformatics; pipeline; analysis; variants; IDS; OPA3; wgs; transcriptome; rna; diagnosis;

    Sammanfattning : Rare diseases are estimated to affect 3.75% of the global population, which roughly translates to 300 million affected individuals. LÄS MER

  7. 5. Functional connectivity analysis in the human brain using ultra-high field MRI

    Master-uppsats, Lunds universitet/Examensarbeten i bioinformatik

    Författare :Theodor Rumetshofer; [2021]
    Nyckelord :Biology and Life Sciences;

    Sammanfattning : Introduction: Functional magnetic resonance imaging (MRI) is a non-invasive method which uses a combination of a strong magnetic field and radio frequency pulses to image magnetic difference between oxygenated and deoxygenated blood in the human brain. This contrast differences can be used to identify areas in the brain when subjects performing an active task in the MRI scanner. LÄS MER